Status: Done!
Total Time
Max Memory Usage
Domain
BinaryClassification
Learn time
5s
Train error
0
Predict train time
0s
Test error
0.023
Predict test time
0s
Log file
... (lines omitted) ...
iteration:627 feature:32 threshold:-6.49234 min-objective:0.759785
iteration:628 feature:10 threshold:12.3812 min-objective:0.762129
iteration:629 feature:8 threshold:-6.77969 min-objective:0.781502
iteration:630 feature:18 threshold:12.1015 min-objective:0.797003
iteration:631 feature:55 threshold:102.466 min-objective:0.814203
iteration:632 feature:42 threshold:8.66092 min-objective:0.719651
iteration:633 feature:5 threshold:2.94061 min-objective:0.778211
iteration:634 feature:6 threshold:33.0421 min-objective:0.78469
iteration:635 feature:43 threshold:28.4061 min-objective:0.816712
iteration:636 feature:9 threshold:136.567 min-objective:0.794414
iteration:637 feature:6 threshold:8.16092 min-objective:0.821699
iteration:638 feature:31 threshold:34.0421 min-objective:0.779661
iteration:639 feature:34 threshold:11.1609 min-objective:0.702976
iteration:640 feature:28 threshold:9.94061 min-objective:0.752822
iteration:641 feature:76 threshold:23.6015 min-objective:0.796053
iteration:642 feature:56 threshold:2.66092 min-objective:0.70923
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iteration:644 feature:13 threshold:7.16092 min-objective:0.80932
iteration:645 feature:86 threshold:16.3812 min-objective:0.746049
iteration:646 feature:14 threshold:4.94061 min-objective:0.803533
iteration:647 feature:73 threshold:3.94061 min-objective:0.76592
iteration:648 feature:38 threshold:50.4828 min-objective:0.828233
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iteration:650 feature:90 threshold:-6.77969 min-objective:0.810879
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iteration:695 feature:46 threshold:-4.77969 min-objective:0.753866
iteration:696 feature:43 threshold:28.4061 min-objective:0.831284
iteration:697 feature:8 threshold:-5.77969 min-objective:0.753788
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iteration:700 feature:34 threshold:11.1609 min-objective:0.818383
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iteration:703 feature:48 threshold:27.0421 min-objective:0.803576
iteration:704 feature:33 threshold:11.1609 min-objective:0.801898
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iteration:711 feature:95 threshold:45.7625 min-objective:0.711199
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iteration:950 feature:28 threshold:13.3812 min-objective:0.738381
iteration:951 feature:56 threshold:2.66092 min-objective:0.750419
iteration:952 feature:33 threshold:5.66092 min-objective:0.736936
iteration:953 feature:48 threshold:27.0421 min-objective:0.784397
iteration:954 feature:22 threshold:51.7031 min-objective:0.823609
iteration:955 feature:13 threshold:5.94061 min-objective:0.751241
iteration:956 feature:32 threshold:-17.433 min-objective:0.702493
iteration:957 feature:41 threshold:10.6609 min-objective:0.746436
iteration:958 feature:31 threshold:34.0421 min-objective:0.735218
iteration:959 feature:69 threshold:15.3812 min-objective:0.603878
iteration:960 feature:95 threshold:57.9234 min-objective:0.791527
iteration:961 feature:31 threshold:-2.27969 min-objective:0.763359
iteration:962 feature:67 threshold:8.66092 min-objective:0.708361
iteration:963 feature:67 threshold:4.94061 min-objective:0.783978
iteration:964 feature:42 threshold:15.3812 min-objective:0.83172
iteration:965 feature:34 threshold:11.1609 min-objective:0.822227
iteration:966 feature:10 threshold:12.3812 min-objective:0.744465
iteration:967 feature:56 threshold:2.66092 min-objective:0.764793
iteration:968 feature:15 threshold:1.94061 min-objective:0.722656
iteration:969 feature:14 threshold:7.66092 min-objective:0.840731
iteration:970 feature:101 threshold:5.66092 min-objective:0.824768
iteration:971 feature:36 threshold:33.0421 min-objective:0.806343
iteration:972 feature:33 threshold:2.88123 min-objective:0.7594
iteration:973 feature:8 threshold:-6.77969 min-objective:0.739665
iteration:974 feature:18 threshold:12.1015 min-objective:0.757788
iteration:975 feature:55 threshold:102.466 min-objective:0.807401
iteration:976 feature:73 threshold:3.94061 min-objective:0.767076
iteration:977 feature:5 threshold:6.66092 min-objective:0.665711
iteration:978 feature:14 threshold:7.66092 min-objective:0.7591
iteration:979 feature:99 threshold:-2.33908 min-objective:0.816769
iteration:980 feature:42 threshold:8.66092 min-objective:0.735654
iteration:981 feature:86 threshold:17.6015 min-objective:0.72638
iteration:982 feature:32 threshold:-6.49234 min-objective:0.830551
iteration:983 feature:56 threshold:-3.27969 min-objective:0.849567
iteration:984 feature:91 threshold:62.9234 min-objective:0.695039
iteration:985 feature:18 threshold:16.3812 min-objective:0.709811
iteration:986 feature:38 threshold:44.7031 min-objective:0.773844
iteration:987 feature:9 threshold:53.2031 min-objective:0.768312
iteration:988 feature:56 threshold:2.66092 min-objective:0.650245
iteration:989 feature:21 threshold:15.6015 min-objective:0.781384
iteration:990 feature:102 threshold:-5.77969 min-objective:0.758957
iteration:991 feature:55 threshold:102.466 min-objective:0.779766
iteration:992 feature:10 threshold:12.3812 min-objective:0.79139
iteration:993 feature:22 threshold:51.7031 min-objective:0.775685
iteration:994 feature:31 threshold:34.0421 min-objective:0.749991
iteration:995 feature:5 threshold:6.66092 min-objective:0.719142
iteration:996 feature:68 threshold:13.8812 min-objective:0.654109
iteration:997 feature:28 threshold:12.6609 min-objective:0.77957
iteration:998 feature:56 threshold:-3.27969 min-objective:0.731519
iteration:999 feature:91 threshold:62.9234 min-objective:0.727749
=== END program2: ./run learn ../program1/data --- OK [5s]
=== END program1: ./run learn ../dataset3/train --- OK [5s]
===== MAIN: predict/evaluate on train data =====
=== START program4: ./run stripLabels ../dataset3/train ../program0/evalTrain.in
=== END program4: ./run stripLabels ../dataset3/train ../program0/evalTrain.in --- OK [1s]
=== START program1: ./run predict ../program0/evalTrain.in ../program0/evalTrain.out
=== START program2: ./run predict ../program0/evalTrain.in ../program0/evalTrain.out.multiclass-output
=== END program2: ./run predict ../program0/evalTrain.in ../program0/evalTrain.out.multiclass-output --- OK [0s]
=== END program1: ./run predict ../program0/evalTrain.in ../program0/evalTrain.out --- OK [0s]
=== START program5: ./run evaluate ../dataset3/train ../program0/evalTrain.out
=== END program5: ./run evaluate ../dataset3/train ../program0/evalTrain.out --- OK [0s]
===== MAIN: predict/evaluate on test data =====
=== START program4: ./run stripLabels ../dataset3/test ../program0/evalTest.in
=== END program4: ./run stripLabels ../dataset3/test ../program0/evalTest.in --- OK [0s]
=== START program1: ./run predict ../program0/evalTest.in ../program0/evalTest.out
=== START program2: ./run predict ../program0/evalTest.in ../program0/evalTest.out.multiclass-output
=== END program2: ./run predict ../program0/evalTest.in ../program0/evalTest.out.multiclass-output --- OK [0s]
=== END program1: ./run predict ../program0/evalTest.in ../program0/evalTest.out --- OK [0s]
=== START program5: ./run evaluate ../dataset3/test ../program0/evalTest.out
=== END program5: ./run evaluate ../dataset3/test ../program0/evalTest.out --- OK [0s]
real 0m14.966s
user 0m8.113s
sys 0m1.052s
supervised-learning : Main entry for supervised learning for training and testing a program on a dataset.
(learner:Program) binary-to-multi : Allows multiclass classification to be run on binary classification datasets (trivial reduction).
(multiclassLearner:Program[MulticlassClassification]) minimalist-boost : Minimalist implementation of boostexter's "scored-text" threshold-based weak learners. Source code included.
(dataset:Dataset) Simple Bio-info Glycosylation Data :
(stripper:Program[Strip]) binary-utils : Validates and inspects a dataset in BinaryClassification format.
(evaluator:Program[Evaluate]) classification-evaluator : Evaluates predictions of classification datasets (discrete outputs).
doTest:
evaluate:
errorRate: 0.0232558139534884
numErrors: 4
numExamples: 172
success: true
time: 0
predict:
predict:
success: true
time: 0
strip:
doTrain:
evaluate:
errorRate: 0.0
numErrors: 0
numExamples: 400
success: true
time: 0
predict:
predict:
success: true
time: 0
strip:
exitCode: 0
learn:
learn:
success: true
time: 5
success: true
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